Department of Image Processing

Automated processing of biological data is essential for an effective and unbiased analysis. We study super-resolution TIRF-SIM microscopy videos of endocytic vesicles at the plasma membrane. In this talk, we will briefly go through our current image processing pipeline, but the main focus will be the tracking, or more precisely, the linking part. We will introduce some older and also some modern approaches and show how this task can be reformulated and solved in another domain, such as using network flows or linear integer programming.

slides:https://docs.google.com/presentation/d/1V3hhUQ-42HGKeonvAxkALmrkHOfo4_WEOq883bA_GGU/edit?usp=sharing